i2b2 Community Wiki
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  • i2b2 is an open-source clinical data warehousing and analytics research platform used at over 250 locations worldwide. i2b2 enables sharing, integration, standardization, and analysis of heterogenous data from healthcare and research. Test
  • The i2b2 Community is a life-sciences-focused open-source, open-data community. This wiki is the central place for the i2b2 Community to communicate and share projects with other users. Here you will find the latest information on the i2b2 Software, what others in the community are doing, and find resources to help answer any questions you may have about the i2b2. 
  • i2b2 is part of the i2b2 tranSMART Foundation, which brings together an NIH-funded enterprise clinical research platform (i2b2) and pharma-developed software for translational research studies (tranSMART).




Older, unsupported add-ons are on the Archived Optional Components page.
  • i2b2 Web Client
  • The i2b2 Web Client is a collection of client-side components designed as an YUI AJAX-based plug-ins that communicate with i2b2 Cells and allow the investigator to query and display the data of the hive.
  • Install Guide
  • Project Request Guide
  • Go to Download


Documentation

Get Software

Announcements

SoftwareVersion
i2b2 Core Server Source Code1.7.11 (March 6, 2019)
i2b2 Core Data Source Code1.7.11 (March 6, 2019)
i2b2 Web Client1.7.11 (March 6, 2019)
i2b2 Documentation1.7.11 (March 6, 2019)
i2b2 VMWare Server/Client Demo1.7.11 (March 6, 2019)
i2b2 Workbench2.0.01 (October 17, 2017)

What's New in i2b2?


Important links:

New i2b2 Community Projects


Accrual to Clinical Trials
The Accrual to Clinical Trials (ACT) project goal is to create a federated network of National Clinical and Translational Science Award (CTSA) Consortium institutions to significantly increase participant accrual to the nation's highest priority clinical trials.
Multi-fact Table
The multi-fact table project is a new feature introduced in 1.7.09 that enables the i2b2 to query more than one fact table. This new feature empowers the i2b2 to adapt to the needs of such projects as the Patient Centered Outcome Research Institute (PCORI) network and the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM). It can also be used for sites that want to be able to query both genomic and phenotype data but don't want the data to reside in a single table.
OMOP
The legacy i2b2 data model is comprised of a central fact table (observation_fact) surrounded by multiple dimension tables (star schema). In the Observation Medical Outcomes Partnership (OMOP) Clinical Data Model (CDM) rather than a central fact table, we have a collection of them distinguished by domain: procedures, condition, drug, measurement, observation, etc. In this project, we modify the CRC to run queries against multiple domain fact tables as dictated by the metadata.
i2b2 Workbench
The i2b2 Workbench is one of two i2b2 clients available to the i2b2 community. It is a collection of client-side components that communicate with i2b2 cells and help aggregate their functionality in the the i2b2 Hive. Each workbench component is designed as an Eclipse-based plug-in that interacts with a hive cell; collectively these plugins provide a cohesive entity to tie all the i2b2 cells together.
i2b2 on Genomics Data
This community project extends the current i2b2 query functionality by providing the ability to query for genotyped subjects by specific annotations related to genetic variants. Also, new query widgets have been built in the i2b2 web client that leverages existing i2b2 infrastructure for querying large strings of text stored in the observation_blob field of the observation_fact table.

See All Community Projects

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