- Source code for ETL process of VCF files
- Example i2b2 ontology & metadata XML
- Example data representation & SQL scripts
- Web Client widgets to submit queries
|i2b2_genomics_project_v1.zip||425 kB||Complete package containing example genomics implementation|
Users must have the DATA_DEID (de-identified) role to be able to execute a text search on the observation_blob field.
The observation_blob field in the observation fact table needs to be full text indexed or the genomics search will not work.