IDRT - Integrated Data Repository Toolkit
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Description

Truncate i2b2 Project?

If you check this, the project will be truncated before the data is uploaded.

Truncate Previous Queries?

This will truncate the previous queries tables.

Database Indexing

Ignore: Don't touch the indexes;
Stop/Start: Stop the indexes before the upload and start them afterwards;
Drop/Create: Drop the indexes before the upload and create them from scratch afterwards.

Set patient_count after import

This will fill the c_totalnum column.

CDISC-ODM CSV Folder

Here you can select the folder that contains all CDISC-ODM CSV files you want to upload.

Include complete Codelists? Use PID Generator

This will generate i2b2 ontology items, that are in a codelist, even if there are no patients for it.

Include PIDs?

This will generate a new i2b2 folder containing the patient IDs (PID) as items.

use the PID Generator, which has to be configured seperately (see Options).

Date Pattern

Here you can select the date pattern that your data uses (e.g. dd-MM-yyyy).

Quote Character

Here you can set the quote character, that you use in your CSV files.

Save Settings?

This will save the settings for the next import. Note: The truncate checks are never saved.