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Session Summary

Obtaining computed phenotypes, Implementation of Natural Language Processing (NLP) and the use of learning algorithms with applications for directing the phenotyping workflow are discussed during this session.

 

 

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Presenters (4)

 

 

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	<body>
		<h5 class="i2b2-event-presenter">Victor Castro</h5>
			<p class="i2b2-event-presenter-position">Corporate Team Lead II</p>
			<p class="i2b2-event-presenter-company">Partners HealthCare</p>
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		<h5 class="i2b2-event-presenter">James Cimino, MD</h5>
			<p class="i2b2-event-presenter-position">Director, Informatics Institute</p>
			<p class="i2b2-event-presenter-company">University of Alabama at Birmingham</p>
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		<h5 class="i2b2-event-presenter">Vivian Gainer</h5>
			<p class="i2b2-event-presenter-position">Corporate Manager</p>
			<p class="i2b2-event-presenter-company">Partners HealthCare</p>
	</body>
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		<h5 class="i2b2-event-presenter">Ken Mandl, MD, MPH </h5>
			<p class="i2b2-event-presenter-position">Director, Computational Health Informatics Program</p>
			<p class="i2b2-event-presenter-company">Boston Children's Hospital</p>
			<p></p>
			<p class="i2b2-event-presenter-position">Professor of Biomedical Informatics</p>
			<p class="i2b2-event-presenter-company">Harvard Medical School</p>
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Presentations (3)

 

Presentation 1: High-throughput Population Phenotyping

Presenter(s): Victor Castro and Vivian Gainer


    • High-quality computed phenotype
    • Partners Biobank
    • Phenotyping the biobank population
    • High-throughput phenotype training

 

View file
nameAUG2016_Castro.pdf
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Presentation 2: i2b2 Development at UAB (UABi2b2)

Presenter(s): James Cimino, MD

 

    • Automatic IRB approval for limited data sets
    • UAB Learning System
    • i2b2 incremental updates
    • Infobuttons for i2b2 (i3b3 plug-in)

 

View file
nameAUG2016_Cimino.pdf
height150

 

 

Presentation 3: Data Fusion in Phenotypes EHR, Registry, PRO

Presenter(s): Ken Mandl, MD, MPH

    • More common phenotypes in Non-Registry
    • More common phenotypes in Registry
    • C3-PRO: Connecting ResearchKit to the Health System Using i2b2 and FHIR

 

View file
nameAUG2016_Mandl.pdf
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