OMOP
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Steps Completed

Image Added  Pre-installation Requirements

Image Added   i2b2 hivedata and pmdata tables were installed and loaded with the data provided in the standard i2b2 data file.

Image Added   CDM tables were installed and loaded with the data from the SynPUF sample data file.

Image Added   i2b2 tables reside in the same database / schema as your CDM tables.

Image Added  Data Installation

Image Added   Created the crcdata tables, stored procedures and OMOP views.

Image Added   Loaded the crcdata tables with the sample data provided in the i2b2-OMOP data package.

Image Added   Created the metadata tables and loaded the sample data provided in the i2b2-OMOP data package.

Image Added   Created the workdata tables and loaded the sample data provided in the i2b2-OMOP data package.

 

Next Steps

After completing the installation of the CRC, Ontology, and Ontology Workplace tables, the next step is to configure the i2b2 software to query the OMOP multiple fact tables.

The procedures for this step are outlined in the the Software Configuration section.