Details
-
Bug
-
Status: Closed
-
Major
-
Resolution: Fixed
-
1.5.00
-
None
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Windows XP Service Pack 3, IIS 6.0, JDK 1.6.0_24, Ant 1.6.5, JBOSS 4.2.2, Axis 2, PHP 5.3.5, SQL Express
Description
Hopefully I'm posting this to the appropriate place. I'm attempting to install the Ontology cell and I'm getting the following build error. I've included the command and the log of the build.
I'm at a loss as I'm not familiar enough with Ant to trace this to the root issue. I've been able to build and deploy the project management module with out issue.
I've configured the various properties files as outlined in the ontology installation guide.
Any assistance is appreciated.
If anymore information is needed please let me know.
Thanks.
C:\Program Files\Java\apache-ant-1.6.5-bin\apache-ant-1.6.5\bin>ant -f "C:\Prog
am Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_build.xml" clean bui
d-all deploy
Buildfile: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_b
ild.xml
common_init:
common_clean:
[echo] Cleaning non-source directories in C:\Program Files\Java\I2B2_Sourc
\edu.harvard.i2b2.ontology
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\classes
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\dist
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\gensrc
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\genlib
clean:
common_init:
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\genlib
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\dist
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\gensrc
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\classes
common_clean:
[echo] Cleaning non-source directories in C:\Program Files\Java\I2B2_Sourc
\edu.harvard.i2b2.ontology
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\classes
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\dist
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\gensrc
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\genlib
build-all:
common_init:
init:
compile:
dist:
[echo] i2b2Common: Creating the archive package!
[copy] Copying 1 file to C:\Program Files\Java\I2B2_Source\edu.harvard.i2b
.ontology\genlib
dist:
[echo] Ontology: Creating the archive package!
common_init:
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\dist
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\gensrc
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\classes
common-classpath:
init:
jaxb_gen:
[xjc] Consider using <depends>/<produces> so that XJC won't do unnecessar
compilation
[xjc] Compiling file:/C:/Program Files/Java/I2B2_Source/edu.harvard.i2b2.
ml/xsd/cell/ont_1.1/ONT_QRY.xsd and others
BUILD FAILED
C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_build.xml:13
The following error occurred while executing this line:
C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\build.xml:80: The f
llowing error occurred while executing this line:
C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\build.xml:44: java.
ang.NullPointerException
Total time: 2 seconds
C:\Program Files\Java\apache-ant-1.6.5-bin\apache-ant-1.6.5\bin>
I'm at a loss as I'm not familiar enough with Ant to trace this to the root issue. I've been able to build and deploy the project management module with out issue.
I've configured the various properties files as outlined in the ontology installation guide.
Any assistance is appreciated.
If anymore information is needed please let me know.
Thanks.
C:\Program Files\Java\apache-ant-1.6.5-bin\apache-ant-1.6.5\bin>ant -f "C:\Prog
am Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_build.xml" clean bui
d-all deploy
Buildfile: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_b
ild.xml
common_init:
common_clean:
[echo] Cleaning non-source directories in C:\Program Files\Java\I2B2_Sourc
\edu.harvard.i2b2.ontology
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\classes
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\dist
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\gensrc
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\genlib
clean:
common_init:
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\genlib
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\dist
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\gensrc
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\classes
common_clean:
[echo] Cleaning non-source directories in C:\Program Files\Java\I2B2_Sourc
\edu.harvard.i2b2.ontology
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\classes
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\dist
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\gensrc
[delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2
2.ontology\genlib
build-all:
common_init:
init:
compile:
dist:
[echo] i2b2Common: Creating the archive package!
[copy] Copying 1 file to C:\Program Files\Java\I2B2_Source\edu.harvard.i2b
.ontology\genlib
dist:
[echo] Ontology: Creating the archive package!
common_init:
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\dist
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\gensrc
[mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont
logy\classes
common-classpath:
init:
jaxb_gen:
[xjc] Consider using <depends>/<produces> so that XJC won't do unnecessar
compilation
[xjc] Compiling file:/C:/Program Files/Java/I2B2_Source/edu.harvard.i2b2.
ml/xsd/cell/ont_1.1/ONT_QRY.xsd and others
BUILD FAILED
C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_build.xml:13
The following error occurred while executing this line:
C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\build.xml:80: The f
llowing error occurred while executing this line:
C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\build.xml:44: java.
ang.NullPointerException
Total time: 2 seconds
C:\Program Files\Java\apache-ant-1.6.5-bin\apache-ant-1.6.5\bin>