[CORE-38] Build Error while installing ontology cell Created: 22/Feb/11 Updated: 05/Jun/14 Resolved: 27/Oct/11 |
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| Status: | Closed |
| Project: | i2b2 Core Software |
| Component/s: | Install, Ontology Cell |
| Affects Version/s: | 1.5.00 |
| Fix Version/s: | 1.6.00 |
| Type: | Bug | Priority: | Major |
| Reporter: | Brian Nordstrom | Assignee: | Mike Mendis |
| Resolution: | Fixed | Votes: | 0 |
| Labels: | None | ||
| Remaining Estimate: | Not Specified | ||
| Time Spent: | Not Specified | ||
| Original Estimate: | Not Specified | ||
| Environment: | Windows XP Service Pack 3, IIS 6.0, JDK 1.6.0_24, Ant 1.6.5, JBOSS 4.2.2, Axis 2, PHP 5.3.5, SQL Express | ||
| Rank: | 0|i0012n: |
| Participant/s: |
| Description |
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Hopefully I'm posting this to the appropriate place. I'm attempting to install the Ontology cell and I'm getting the following build error. I've included the command and the log of the build. I'm at a loss as I'm not familiar enough with Ant to trace this to the root issue. I've been able to build and deploy the project management module with out issue. I've configured the various properties files as outlined in the ontology installation guide. Any assistance is appreciated. If anymore information is needed please let me know. Thanks. C:\Program Files\Java\apache-ant-1.6.5-bin\apache-ant-1.6.5\bin>ant -f "C:\Prog am Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_build.xml" clean bui d-all deploy Buildfile: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_b ild.xml common_init: common_clean: [echo] Cleaning non-source directories in C:\Program Files\Java\I2B2_Sourc \edu.harvard.i2b2.ontology [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\classes [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\dist [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\gensrc [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\genlib clean: common_init: [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\genlib [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\dist [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\gensrc [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\classes common_clean: [echo] Cleaning non-source directories in C:\Program Files\Java\I2B2_Sourc \edu.harvard.i2b2.ontology [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\classes [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\dist [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\gensrc [delete] Deleting directory C:\Program Files\Java\I2B2_Source\edu.harvard.i2 2.ontology\genlib build-all: common_init: init: compile: dist: [echo] i2b2Common: Creating the archive package! [copy] Copying 1 file to C:\Program Files\Java\I2B2_Source\edu.harvard.i2b .ontology\genlib dist: [echo] Ontology: Creating the archive package! common_init: [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\dist [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\gensrc [mkdir] Created dir: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ont logy\classes common-classpath: init: jaxb_gen: [xjc] Consider using <depends>/<produces> so that XJC won't do unnecessar compilation [xjc] Compiling file:/C:/Program Files/Java/I2B2_Source/edu.harvard.i2b2. ml/xsd/cell/ont_1.1/ONT_QRY.xsd and others BUILD FAILED C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\master_build.xml:13 The following error occurred while executing this line: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\build.xml:80: The f llowing error occurred while executing this line: C:\Program Files\Java\I2B2_Source\edu.harvard.i2b2.ontology\build.xml:44: java. ang.NullPointerException Total time: 2 seconds C:\Program Files\Java\apache-ant-1.6.5-bin\apache-ant-1.6.5\bin> |
| Comments |
| Comment by Brian Nordstrom [ 25/Feb/11 ] |
| Tried switching my java version to 6.0 and rebuilding. I have the same problem. |
| Comment by Mike Mendis [ 26/Mar/11 ] |
| Try using axis 1.1.1 |
| Comment by Brian Nordstrom [ 28/Mar/11 ] |
|
I'll give it a shot. Thanks. |
| Comment by Mike Mendis [ 27/Oct/11 ] |
| If you still need help check out http://groups.google.com/group/i2b2-install-help |