TimeAlign
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  1. Download the TimeAlign plugin (.jar).
  2. Place the downloaded .jar file in your i2b2 workbench's workbench/plugins directory (picture).
  3. Launch your i2b2 Workbench and log in. Select from menu: Window -> Show View -> Other... -> Align-in-time Category -> Align-in-time View to launch TimeAlign. If you do not see Align-in-time Category, please read on.
  4. Make sure your i2b2workbench.properties file contains the following line. (Picture) (Where to find i2b2workbench.properties?)
    Panel

    writeTimelineFile=yes

  5. Make sure your configuration file workbench/configuration/config.ini contains only the following. You can safely replace the content of your file with the following.
    Panel

    #Product Runtime Configuration File

    osgi.splashPath=platform:/base/plugins/edu.harvard.i2b2.eclipse
    eclipse.product=edu.harvard.i2b2.eclipse.product
    osgi.bundles=org.eclipse.equinox.common@2:start,org.eclipse.update.configurator@3:start,org.eclipse.core.runtime@start
    osgi.bundles.defaultStartLevel=4
    i2b2.homebase=https://www.i2b2.org/updateSite

Quick Start

Video Demonstration

 

TimeAlign Getting Started video

 

Older Lifelines2 videos from HCIL

 

Video

Image Added



Image Added

Image Added

Format

.mp4 (download)

 

.swf (view in browser)

.sfw

Run Time

5.28

 

4:58

8:11

Description

Demonstrates how to
1. launch TimeAlign
2. create data via i2b2's query services
3. navigate around timeAlign's basic features

 

Scenario 1: Identifying potential patients with contrast-related nephropathy.

Scenario 2: Investigating heparin-induced thrombocytopenia.

gettingStarted.mp4

http://www.cs.umd.edu/hcil/lifelines2/videos/Lifelines2-(Contrast-Creatinine)-11-10-08_flash/demo(11-10-2008)-screen.jpg

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