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  1. i2b2 Documentation
  2. DOC-2

Upgrade scripts install ICD9-ICD10 ontology heirarchy

Details

    • Task
    • Status: Backlog
    • Minor
    • Resolution: Unresolved
    • None
    • None
    • None

    Description

      The upgrade script for 1.7.07 adds a CA pointer in TABLE_ACCESS to the new ICD10_ICD9 shard. Unless you're using i2b2 for a very specific clinical application, this creates an unusable "Diagnoses (ICD10)" folder in Navigate Terms which just returns an error when clicked. Our i2b2 doesn't have diagnoses at all so I had to hide this after upgrade.

      The script Metadata/scripts/table_access_insert_data.sql should be part of the Demo Data package, not the standard upgrade. You might say the same for schemes_insert_data.sql, but that's not as annoying.

      Attachments

        Activity

          zabeus Joseph Applegate created issue -
          jmd86 Janice Donahoe made changes -
          Field Original Value New Value
          Affects Database/s SQL Server [ 10189 ] All databases [ 10219 ]
          Component/s Data [ 10050 ]
          Fix Version/s 1.7.08 [ 10204 ]
          Assignee Lori Phillips [ lcp5 ]
          i2b2 Sponsored Project/s i2b2 Core [ 10196 ]
          Priority Major [ 3 ] Minor [ 4 ]
          Status New [ 10000 ] Open [ 1 ]
          lcp5 Lori Phillips made changes -
          Assignee Lori Phillips [ lcp5 ] Janice Donahoe [ jmd86 ]
          jmd86 Janice Donahoe made changes -
          Issue Type Bug [ 1 ] Documentation [ 5 ]
          jmd86 Janice Donahoe made changes -
          Fix Version/s 1.7.08 [ 10204 ]
          jmd86 Janice Donahoe made changes -
          Component/s Data [ 10050 ]
          Key CORE-205 DOC-2
          Affects Version/s 1.7.07 [ 10201 ]
          Workflow i2b2 Issues Workflow [ 11131 ] Software Simplified Workflow for Project DOC [ 11402 ]
          Issue Type Documentation [ 5 ] Task [ 3 ]
          Project i2b2 Core Software [ 10034 ] Documentation [ 10334 ]
          Status Open [ 1 ] Backlog [ 10203 ]

          People

            jmd86 Janice Donahoe
            zabeus Joseph Applegate
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            Dates

              Created:
              Updated: