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  1. i2b2 Documentation
  2. DOC-2

Upgrade scripts install ICD9-ICD10 ontology heirarchy

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    • Task
    • Status: Backlog
    • Minor
    • Resolution: Unresolved
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    Description

      The upgrade script for 1.7.07 adds a CA pointer in TABLE_ACCESS to the new ICD10_ICD9 shard. Unless you're using i2b2 for a very specific clinical application, this creates an unusable "Diagnoses (ICD10)" folder in Navigate Terms which just returns an error when clicked. Our i2b2 doesn't have diagnoses at all so I had to hide this after upgrade.

      The script Metadata/scripts/table_access_insert_data.sql should be part of the Demo Data package, not the standard upgrade. You might say the same for schemes_insert_data.sql, but that's not as annoying.

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            jmd86 Janice Donahoe
            zabeus Joseph Applegate
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              Created:
              Updated: