Details

    • Bug
    • Status: Open
    • Blocker
    • Resolution: Unresolved
    • None
    • TBD
    • None
    • None
    • VMImage for server and workbench.

    Description

      I am a new user and getting up to speed with i2b2 software. I have observed the following issues.

      (i) VMware Server is no more available to download. VM image is cannot be opened by the current player or the workstation.
      (ii) After using VMWare converter I was able to open the image. But the network configuration is all messed up.
      (iii) Documentation still refers to old users which do not exist. I was able to access the only root. I saw wildfly user and demouser password did not work.
      (iv) The database is not Oracle. I think is postgres.
      (v) I was not able to connect with the workbench vm image. The pm services url even though I was able to get the "getVersion" working from webbrowser. It is not recognized by the workbench. Documentation or troubleshooting section is out of date.
      (vi) I was not able to locate the log file. I was not able to access the wildfly or axis2 administration console. Logs refers to http://127.0.0.1:9990/management
      But this url is not accessible.
      (vii) Webclient is working and the workbench connection is not working.
      (viii) Postgres db details are missing.






      Attachments

        Activity

          Additional debug info I found on why my workbench is not working.

          https://github.com/i2b2/i2b2-workbench/blob/122346dddb84b88848e719a87c04e0e0153497b8/edu.harvard.i2b2.eclipse/src/edu/harvard/i2b2/eclipse/login/LoginDialog.java
          there is a method "getHiveMessageVersion()" If the version is null then it raises this error.

          The response from the web browser is
          ------
          <ns3:response xmlns:ns3="http://www.i2b2.org/xsd/hive/msg/version/" xmlns:ns2="http://www.i2b2.org/xsd/hive/msg/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/pm/1.1/">
          <message_body>
          <i2b2_message_version>1.1</i2b2_message_version>
          </message_body>
          </ns3:response>
          -----

          But in the i2b2.log after turning on the debug I see the message body is null.

          2018-05-22 14:23:01,121 INFO main edu.harvard.i2b2.eclipse.login.LoginDialog - workbench message version=1.1
          2018-05-22 14:23:02,199 INFO main edu.harvard.i2b2.eclipse.login.LoginDialog - http://services.i2b2.org/i2b2/services/PMService/getVersion
          2018-05-22 14:23:02,199 INFO main edu.harvard.i2b2.eclipse.login.LoginDialog - version response: <ns3:response xmlns:ns2="http://www.i2b2.org/xsd/hive/msg/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/pm/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/hive/msg/version/">
              <message_body />
          </ns3:response>
          --------

          Any Help is appreciated to make the workbench work.
          akemisetti Anil Kemisetti added a comment - Additional debug info I found on why my workbench is not working. https://github.com/i2b2/i2b2-workbench/blob/122346dddb84b88848e719a87c04e0e0153497b8/edu.harvard.i2b2.eclipse/src/edu/harvard/i2b2/eclipse/login/LoginDialog.java there is a method "getHiveMessageVersion()" If the version is null then it raises this error. The response from the web browser is ------ <ns3:response xmlns:ns3=" http://www.i2b2.org/xsd/hive/msg/version/ " xmlns:ns2=" http://www.i2b2.org/xsd/hive/msg/1.1/ " xmlns:ns4=" http://www.i2b2.org/xsd/cell/pm/1.1/ "> <message_body> <i2b2_message_version>1.1</i2b2_message_version> </message_body> </ns3:response> ----- But in the i2b2.log after turning on the debug I see the message body is null. 2018-05-22 14:23:01,121 INFO main edu.harvard.i2b2.eclipse.login.LoginDialog - workbench message version=1.1 2018-05-22 14:23:02,199 INFO main edu.harvard.i2b2.eclipse.login.LoginDialog - http://services.i2b2.org/i2b2/services/PMService/getVersion 2018-05-22 14:23:02,199 INFO main edu.harvard.i2b2.eclipse.login.LoginDialog - version response: <ns3:response xmlns:ns2=" http://www.i2b2.org/xsd/hive/msg/1.1/ " xmlns:ns4=" http://www.i2b2.org/xsd/cell/pm/1.1/ " xmlns:ns3=" http://www.i2b2.org/xsd/hive/msg/version/ ">     <message_body /> </ns3:response> -------- Any Help is appreciated to make the workbench work.

          People

            mem61 Mike Mendis
            akemisetti Anil Kemisetti
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            Dates

              Created:
              Updated: