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  1. i2b2 Core Software
  2. CORE-258

OMOP: Error returned when trying to view details of an item on the timeline

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 1.7.09
    • Fix Version/s: 1.7.09
    • Component/s: CRC Cell
    • Labels:
      None
    • Rank:
      0|i003cn:
    • Developer Notes:
      For large OMOP ontologies (i.e SNOMED) there may be a delay before seeing the observation fact. The code has to look up the concept by code ... this can take a while with large ontologies
    • Testing Notes:
      tested and verified details c an be seen in the i2b2 timeline which clicking on the tick mark.

      Description

      In i2b2 Web Client when a user double clicks on a tick mark in the timeline, additional details about the observation will display.

      However, in OMOP the data schema is setup differently in that there is no "OBSERVATION_FACT" table. The get_observationfact_by_primary_key (getIbservationfact_byPrimaryKey) service is trying to call a table that does not exist. This results in the following exception being returned from the server:

      "Invalid object name 'i2b2omop.dbo.observation_fact'"

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            People

            • Assignee:
              jmd86 Janice Donahoe
              Reporter:
              jmd86 Janice Donahoe
              Participant/s:
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              Dates

              • Created:
                Updated:
                Resolved:

                Git Source Code