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  1. i2b2 Core Software
  2. CORE-143

Do not require M_APPLIED_PATH when retrieving modifier information from the Ontology Cell

Details

    • Bug
    • Status: Closed
    • Major
    • Resolution: Fixed
    • 1.7.02
    • 1.7.03
    • Ontology Cell
    • None
    • Modifiers
    • i2b2 Core
    • PCORI, SCILHS
    • All databases

    Description

      The M_APPLIED_PATH is a column in the metadata tables that is primarily used for modifiers (concepts will have an '@'). The data in this column is used by the Ontology cell to determine where in the hierarchical tree the modifier should appear in the Navigate Terms and Edit Terms views. In the Edit Terms view it is used when finding the modifier associated to a term.

      Currently, when you run a query with a modifier the ontology cell is requiring M_APPLIED_PATH in order to retrieve the correct modifier and the associated concept. This requirement is not necessary. The Ontology cell can ignore <applied_path> when it is sent in the getModifierInfo message as its intended use is for display purposes only and not for identification. The C_FULLNAME is sufficient in identifying the appropriate modifier.

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            jmd86 Janice Donahoe created issue -
            jmd86 Janice Donahoe made changes -
            Field Original Value New Value
            Fix Version/s 1.7.03 [ 10156 ]
            Assignee Lori Phillips [ lcp5 ]
            i2b2 Related Project/s PCORI,SCILHS [ 10201, 10221 ]
            i2b2 Sponsored Project/s i2b2 Core [ 10196 ]
            Status New [ 10000 ] Open [ 1 ]
            lcp5 Lori Phillips made changes -
            Status Open [ 1 ] In Progress [ 3 ]
            lcp5 Lori Phillips made changes -
            Status In Progress [ 3 ] Ready to Test [ 10001 ]
            lcp5 Lori Phillips made changes -
            Assignee Lori Phillips [ lcp5 ] Janice Donahoe [ jmd86 ]
            jmd86 Janice Donahoe made changes -
            Status Ready to Test [ 10001 ] Testing [ 10002 ]
            jmd86 Janice Donahoe made changes -
            Resolution Fixed [ 1 ]
            Status Testing [ 10002 ] Resolved [ 5 ]
            jmd86 Janice Donahoe made changes -
            Status Resolved [ 5 ] Closed [ 6 ]
            tfmorris Tom Morris added a comment -
            The change associated with this issue caused a significant performance regression in the Ontology cell in 1.7.03. Lookups which used to return a single row now return many rows due to the ONT cell ignoring the additional qualification.
            tfmorris Tom Morris added a comment - The change associated with this issue caused a significant performance regression in the Ontology cell in 1.7.03. Lookups which used to return a single row now return many rows due to the ONT cell ignoring the additional qualification.
            jmd86 Janice Donahoe made changes -
            Link This issue related to CORE-203 [ CORE-203 ]

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              jmd86 Janice Donahoe
              jmd86 Janice Donahoe
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              Dates

                Created:
                Updated:
                Resolved: