The i2b2 on OMOP installation guide is designed to assist users with installing and setting up an existing i2b2 environment to work with the OMOP CDM data.

About this Guide

The i2b2 on OMOP project enables the classic i2b2 Software to run against a database that uses the OMOP CDM structure (multiple fact tables). This guide along with the provided source code will help configure your system for OMOP CDM processing.

Assumptions

This installation guide assumes the following: 

  • You have a working version of i2b2 that is running release 1.7.09 or higher.
  • The i2b2 Admin module has been installed.
  • Your CDM tables have been loaded with the CMS SynPUF 1k data set provided by OMOP
  • The OMOP CDM tables are setup on the same server as the i2b2 data tables.

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					<b>Important</b>
					<br>If you are new to i2b2 or not familiar with how to install and setup the i2b2, we highly recommend you look at the <a href="https://community.i2b2.org/wiki/display/getstarted/i2b2+Installation+Guide">i2b2 Installation Guide</a> and go through the
steps to setup the i2b2 demo environment.
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