Developers Getting Started With i2b2
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To create users that can be authenticated via SAML:

  1. Create a user for each SAML-authenticating user with the user name set to the SAML EPPN.
  2. Create a pm_user_param setting authentication_method to SAML.
  3. Alternately, configure the user registration tool for federated mode, and it will allow users to create an i2b2 account if they have a valid SAML authentication. (Such users will still not have access to any projects until the administrator adds projects to his/her profile.)

Also see the Chapter on Configuring SAML for client/server configuration.