SETL - Standards-based Extract, Transform, and Load
Space shortcuts
Space Tools

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

The Standard-based Extract, Transform, and Load (SETL) cell supports interoperability between i2b2 and standards-based clinical data formats. Currently nearing completion are tools to import and process HL7 Continuity of Care Documents (CCDs), which healthcare systems will shortly be producing as a requirement of Meaningful Use.

...

CCD Import Image Added

Use case 1: Process CCD documents on the fly for live refresh of patient data in SMART apps

See Click on the links below to read our recent AMIA presentation on this: Klann J, Porter A, Wattanasin N, Murphy S. Importing Continuity of Care Documents into i2b2 and SMART. AMIA Joint Summits 2014;143.abstract and see our presentation slides.

Wiki Markup
Klann J, Porter A, Wattanasin N, Murphy S. [Importing Continuity of Care Documents into i2b2 and SMART.|^jklann-CRI2014abstract_v03_revision.pdf] _AMIA Joint Summits_ 2014;143. \[[associated slides|^jklann-amia14cri-setltalk-forpdf.pdf]\]

Use case 2: Import CCD documents directly into the i2b2 data repository

Presently encounter notes, problem list, medication list, and demographics are supported. More information available soon.

Software release and related tools

Wiki Markup
Complete Source Code _\[coming soon\!\]_

Meaningful Use ontologies:

  • Wiki Markup
    [SNOMED|http://i2b2.bioontology.org/] \[or extract a [newer version|NCBO:NCBO Ontology Tools]\]
  • Wiki Markup
    RxNorm _\[coming soon\]_
  • Wiki Markup
    _\[more to come\]_

Wiki Markup
Related project: [OHT-MDMI|http://www.semantxinc.com/ohtmdmi-project.html] _\[software release available in May\] _
Related project: [SMART-i2b2|SMArt:SMART i2b2]

Section
Column
width60%
Recently Updated
Column
width5%

Column
width35%
Navigate space
Page Tree Search
Page Tree