The Standard-based Extract, Transform, and Load (SETL) cell supports interoperability between i2b2 and standards-based clinical data formats. Currently nearing completion are tools to import and process HL7 Continuity of Care Documents (CCDs), which healthcare systems will shortly be producing as a requirement of Meaningful Use.

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CCD Import 

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Use case 1: Process CCD documents on the fly for live refresh of patient data in SMART apps

Click on the links below to read our recent AMIA abstract and see our presentation slides.

Wiki MarkupKlann J, Porter A, Wattanasin N, Murphy S. [Importing Continuity of Care Documents into i2b2 and SMART.|^jklann-CRI2014abstract_v03_revision.pdf] _AMIA Joint Summits_ 2014;143. \ [[associated slides|^jklann-amia14cri-setltalk-forpdf.pdf]\]

Use case 2: Import CCD documents directly into the i2b2 data repository

Presently encounter notes, problem list, medication list, and demographics are supported. More information available soon.

Software release and related tools

Complete Source Code _\[coming soon\!\]_

Our first public release will be made available in the coming months and will include:

• Complete source code
• A graphical tool to import CCDs
• Meaningful Use ontologies:

  • Wiki Markup
    [SNOMED|http://i2b2.bioontology.org/] \[or extract a [newer version|NCBO:NCBO Ontology Tools]\]

  • Wiki Markup
    RxNorm _\[coming soon\]_

  • Wiki Markup
    _\[more to come\]_

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  • • SNOMED
    • RxNorm
    • Meaningful Use -compatible demographics

  Currently, the SNOMED ontology is available for download [or extract a newer version].

  Related project: OHT-MDMI [software release available in May] 
  Related project: SMART-i2b2
  Related project: QueryHealth

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