OMOP
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Comment: Migration of unmigrated content due to installation of a new plugin

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Assumptions

  • The data

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  • in this package

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  • is based on the CMS SynPUF 1K data set provided by OMOP.
  • The project for this installation will be called omop.
  • The PM Cell and hive are already installed.

html-text
<div class="i2b2-panel">
    <table class="i2b2-note">
        <colgroup>
            <col width="24">
            <col>
        </colgroup>
        <tbody>
            <tr>
                <td>
                    <img src="https://community.i2b2.org/wiki/download/attachments/14091764/icon_note.png" width="16" height="16" align="absmiddle" alt="info" border="0">
                </td>
                <td>
                    <b>Note</b>
                    <br><br>You will need to know the domain that was defined during the PM Cell installation.
                </td>
            </tr>
        </tbody>
    </table>
</div>

Order of Installation

It is important the tables, procedures, and views are installed in the order defined below. Failure to do so will result in errors when running the scripts.

CRC Tables

Image Modified   crcdata: create tables

Image Modified   crcdata: create stored procedures

Image Modified   crcdata: load data

Image Modified   crcdata: create OMOP views

Ontology Tables

Image Modified   metadata: create tables

Image Modified   metadata: load

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data

Workplace Tables

Image Modified   workdata: create tables

Image Modified 

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 workdata: load

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data