Page History
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User-created Demographics
Definition file
Example:1969_Definition_For_Demographics_8_5_25.csv
| TABLE_INSTANCE_ID | TABLE_INSTANCE_NAME | USER_ID | GROUP_ID | SET_INDEX | C_FACTTABLECOLUMN | C_TABLENAME | COLUMN_NAME | C_FULLPATH | C_COLUMNNAME | C_COLUMNDATATYPE | C_OPERATOR | C_DIMCODE | AGG_TYPE | CONSTRAIN_BY_DATE_TO | CONSTRAIN_BY_DATE_FROM | CONSTRAIN_BY_VALUE_OPERATOR | CONSTRAIN_BY_VALUE_CONSTRAINT | CONSTRAIN_BY_VALUE_UNIT_OF_MEASURE | CONSTRAIN_BY_VALUE_TYPE | CREATE_DATE |
| 7 | DEM_6_27 | demoManager | SQLServerLarge | 0 | sex_cd | patient_dimension | Gender | @ | @ | @ | @ | @ | Value | 37:14.3 | ||||||
| 7 | DEM_6_27 | demoManager | SQLServerLarge | 1 | age_in_years_num | patient_dimension | Age | @ | @ | @ | @ | @ | Value | 37:14.3 | ||||||
| 7 | DEM_6_27 | demoManager | SQLServerLarge | 2 | race_cd | patient_dimension | Race | @ | @ | @ | @ | @ | Value | 37:14.3 | ||||||
| 7 | DEM_6_27 | demoManager | SQLServerLarge | 3 | patient_num | patient_dimension | (children) < 18 years old | \\ACT_DEMO\ACT\Demographics\Age\< 18 years old\ | birth_date | N | > | dateadd(YY, -18, GETDATE()) | Exists | 37:14.3 |
Data file:
Example: 1969_Demographics_8_5_25_08052025.cs
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User-created Labs
Definition file
Example: 2282_Definition_For_LAB_TESTS_HUGEPT_AGGOPTIONS
| TABLE_INSTANCE_ID | TABLE_INSTANCE_NAME | USER_ID | GROUP_ID | SET_INDEX | C_FACTTABLECOLUMN | C_TABLENAME | COLUMN_NAME | C_FULLPATH | C_COLUMNNAME | C_COLUMNDATATYPE | C_OPERATOR | C_DIMCODE | AGG_TYPE | CONSTRAIN_BY_DATE_TO | CONSTRAIN_BY_DATE_FROM | CONSTRAIN_BY_VALUE_OPERATOR | CONSTRAIN_BY_VALUE_CONSTRAINT | CONSTRAIN_BY_VALUE_UNIT_OF_MEASURE | CONSTRAIN_BY_VALUE_TYPE | CREATE_DATE |
| 310 | LAB_TESTS_HUGEPT_AGGOPTIONS | act | NODE9 | 0 | sex_cd | patient_dimension | Gender | @ | @ | @ | @ | @ | Value | 25:57.3 | ||||||
| 310 | LAB_TESTS_HUGEPT_AGGOPTIONS | act | NODE9 | 1 | age_in_years_num | patient_dimension | Age | @ | @ | @ | @ | @ | Value | 25:57.3 | ||||||
| 310 | LAB_TESTS_HUGEPT_AGGOPTIONS | act | NODE9 | 2 | race_cd | patient_dimension | Race | @ | @ | @ | @ | @ | Value | 25:57.3 | ||||||
| 310 | LAB_TESTS_HUGEPT_AGGOPTIONS | act | NODE9 | 3 | race_cd | patient_dimension | Ethnicity | @ | @ | @ | @ | @ | Value | 25:57.3 | ||||||
| 310 | LAB_TESTS_HUGEPT_AGGOPTIONS | act | NODE9 | 4 | concept_cd | concept_dimension | Cholesterol (Group:CHOL) | \\i2b2_LABS\i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB17) Lipid Tests\CHOL\ | concept_path | N | like | \i2b2\Labtests\LAB\(LLB16) Chemistry\(LLB17) Lipid Tests\CHOL\ | NumFacts | 25:57.3 | ||||||
Data file:
Example: 2282_LAB_TESTS_HUGEPT_AGGOPTIONS_08122025
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| NAME | VALUE | Group_id |
|---|---|---|
RPDO_<Table_instance_id> Example: RPDO_17 | EXEC i2b2synthea8.dbo.usp_rpdo2 @TABLE_INSTANCE_ID=<Table_instance_id> @RESULT_INSTANCE_ID={{{RESULT_INSTANCE_ID}}} @MIN_ROW=0 @MAX_ROW=10000 | SQLServerLarge |
Example:
Database updates- Data request
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submission/Data file creation
QT_QUERY_RESULT_INSTANCE
When the User runs a query with User created Data Request breakdown option selected, a row is logged in the QT_Query_Result_Instance for the result_type_id generated in the QT_RESULT TYPE
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The EXEC statement in Value column is updated with values value for table_instance_id and result_instance_id to generate the Data file is executedid
Example:
| NAME | VALUE |
|---|---|
RPDO_<Table_instance_id> Example: RPDO_144 | EXEC i2b2synthea8.dbo.usp_rpdo2 @TABLE_INSTANCE_ID=17 @RESULT_INSTANCE_ID=1729@MIN{{{RESULT_INSTANCE_ID}}},@MIN_ROW=0 @MAX_ROW=1000099999999 |
{{{RESULT_INSTANCE_ID}}} gets replaced with QT_
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QUERY_RESULT_INSTANCE.Result_instance_id as the stored-procedure in the back-end gets executed.
at the time of data file creation.
QT_XML_RESULT:
A row is logged for the result_instance_id of the data request submitted at the time of query run. Metadata about data request
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Metadata about data request queries are stored in the QT_XML_RESULT table, in the XML_VALUE field. The metadata gets updated as the data export process is completed (from data request submission to data file creation)
| Column Name | Value (example) |
|---|---|
| Result_Instance_Id | 1729 |
| XML_Value | <?xml version="1.0" encoding="UTF-8" standalone="yes"?> <ns10:i2b2_result_envelope xmlns:ns6="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/" xmlns:ns5="http://www.i2b2.org/xsd/hive/msg/1.1/" xmlns:ns8="http://www.i2b2.org/xsd/cell/pm/1.1/" xmlns:ns7="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns9="http://www.i2b2.org/xsd/cell/ont/1.1/" xmlns:ns10="http://www.i2b2.org/xsd/hive/msg/result/1.1/" xmlns:ns2="http://www.i2b2.org/xsd/hive/pdo/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/pdo/1.1/"> <body> <ns10:result name="RPDO_17"> <data column="SUBMITTED" type="string">20250808_125429</data> <data column="EMAIL" type="string">rmetta@mgb.org</data> <data column="QUEUED" type="string">20250808_125631</data> <data column="PROCESSING" type="string">20250808_125631</data> <data column="DIRECTORY" type="string">/opt/dataexport/SQLServerLarge/724</data> <data column="FINISHED" type="string">20250808_125633</data> <data column="APPROVEDBY" type="string">demoManager</data> </ns10:result> </body> </ns10:i2b2_result_envelope> |
Example:
Data file format/location and Email parameters set-up: HIVE_CELL_PARAMS
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