Developers Getting Started With i2b2
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  • Aggregation options for a non-numeric variable such as Diagnosis are Existence (Yes/No), Count: Number of Concepts, Count: Number of Dates, Count Number of Encounters, Count Number of Facts, Count Number of Providers, Date (First), Date (Most Recent), Most Frequent Concept (Codes)

  • Aggregation options for concepts that support numeric values such as labs include Average, Min, Max, etc. in addition to all the functions available to normal variables

Aggregation Options

Explanation

Existence (Yes/No)

Whether the patient has an observation of this concept. This is the default option.

Count: Number of Concepts

Total number of concepts

Count: Number of Dates

Total number of dates for the participant

Count: Number of Encounters

Total number of encounters for the participant

Count: Number of Facts

Total number of observations

Count: Number of Providers

Total number of providers for the participant

Date (First)

Date of earliest observation

Date (Most Recent)

Date of the most recent observation

Count

Total number of observations

All Concepts (Names/Text)

All concept names are listed

Most Frequent Concept (Names/Text)

Most frequent concept name

All Concepts (Codes)

All concept codes are listed

Most Frequent Concept (Codes)

Most frequent concept code

Minimum Value

Minimum value of all numeric values observations

Maximum Value

Maximum value of all numeric values observations

Median Value

Median value of all numeric values observations

Average Value

Average value of all numeric values observations

Mode (Most Frequent Value)

Most frequent value for numeric, enum, blob observations

List of All Values

List of all values for numeric, enum, blob observations

Preview and Save Table

Table Design can be previewed to get a preview of the data export file that will be generated.

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Data Export - User-created Data Requests (Manager process)

User-created data requests are managed by Data Request Manager tool where a manager user can view the request details and generate data files

Data Request Manager


Generate data file 

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Developers Getting Started With i2b2 getstarted