Message-ID: <1781247007.7854.1711647289205.JavaMail.confluence@ip-172-30-4-17.ec2.internal> Subject: Exported From Confluence MIME-Version: 1.0 Content-Type: multipart/related; boundary="----=_Part_7853_1045600162.1711647289204" ------=_Part_7853_1045600162.1711647289204 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Content-Location: file:///C:/exported.html 300. IDRT Import and Mapping Tool (IMT)

300. IDRT Import and Mapping Tool (IMT)

 

Summary

The IDRT Import and Mapping Tool (IMT) serves two purposes:

  1. Importing data from various source formats into i2b2
  2. Create and maintain a sophisticated i2b2 ontology for navigation and qu= erying

The IMT is Java client application. It is expected to run locally and re= quires a network connection to the i2b2 database.

We describe the general architecture in detail, but you first may want to download and install the application. In case you find = a bug, want to request additional features or are willing to contribute own= code, please send a request.

Importing= datasets

The IMT provides extractors for importing data from certain generic formats like character-separated files (CSV), database scripts (SQL), or XML-files in CDISC ODM.

Additionally, a number of special dataset specifications can be imported, too:

Edit= ing the i2b2 ontology

The IMT furthermore provides a means to rearrange the i2b2 ontology by <= a href=3D"/wiki/display/IDRT/350.+Edit+i2b2+Ontology">creating, renaming, m= oving and mapping source concepts as well as folders with the help of a= graphical user interface.

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