Message-ID: <1851166122.8010.1711658040866.JavaMail.confluence@ip-172-30-4-17.ec2.internal> Subject: Exported From Confluence MIME-Version: 1.0 Content-Type: multipart/related; boundary="----=_Part_8009_455634024.1711658040865" ------=_Part_8009_455634024.1711658040865 Content-Type: text/html; charset=UTF-8 Content-Transfer-Encoding: quoted-printable Content-Location: file:///C:/exported.html 10.2.1 Source Code and Directory Structure

10.2.1 Source Code and Directory Structure

Source Code for Data Repository (CRC) Cell

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In the chapter titled Install i2b2 Server-Common, you extracted= the files from the i2b2 Core Source Code zip file into a directory of your= choosing (YOUR_I2B2_SRC_DIR). One of the files extracted was a fo= lder called edu.harvard.i2b2.crc and it is in this folder = where the files for the CRC installation reside.

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C= RC Directory Structure

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The main directory for the CRC Cell is edu.harvard.i2b2.crc and as stated earlier this directory resides in YOUR_I2B2_= SRC_DIR. During this installation of the CRC cell we will be = editing a number of files that reside within the CRC directory. These files= and their location are outlined below:

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Main CRC Directory: YOUR_I2B2_SRC_DIR\i2b2\edu.harvard.i2b2.crc\

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File Name

Description

build.properties

Contains properties needed during the buildi= ng of the CRC Cell.

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Directory for CRC and C= RCLoader Properties: YOUR_I2B2_SRC_DIR\i2b2\edu.harvard.i2b2.= crc\etc\spring\

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File Name

Description

crc_application_directory.properties

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Define the location for your application pro= perties.

edu.harvard.i2b2.crc.loader.properties

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Define the properties for the PM and FR cell= s for the CRCLoader.

CRCLoaderApplicationContext.xml

Define several properties for database sourc= es and lookup table for the CRCLoader.

crc.properties

Define the properties for the CRC cell, CRC = service account, and various parameters that are used by the CRC when runni= ng queries on the server.

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Directory for Data Sour= ce Configuration: YOUR_I2B2_SRC_DIR\i2b2\edu.harvard.i2b2.crc= \etc\jboss\

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File Name

Description

crc-ds.xml

Configure the JBoss Data source for the CRC = cell.

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