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C_METADATAXML
The _C_METADATAXML_ is an optional field to store extra information about the concept in xml format. It is currently used to describe value metadata associated with a lab finding. The next several fields, _C_FACTTABLECOLUMN, _C_TABLENAME, _C_COLUMNNAME, _C_OPERATOR, and C_DIMCODE are used to help construct a metadaMetadata XML
The payload of C_METADATAXML column (C_METADATAXML attribute within a metadata row) controls the pop-up behavior in i2b2 webclient (and other interfaces … for Body temperature values in a particular range. When c_metadataxml is NULL in a metadata row, no pop-up is displayed if that row is selected in the i2b2 folderi2b2-on-OMOP With ENACT-OMOP Ontology v4.1
PATIENT_DIMENSION and VISIT_DIMENSION tables before you run the db_demodata_load_data ant target. The Lab metadata tables should have data in the C_METADATAXML column in order for the lab values to be queriable from UI If the C_METADATAXML is missing from the source ontology Lab metadata file, you can load the values fromAUG_2012_Ont.ppt
) C_BASECODE VARCHAR2(50) VARCHAR(50) C_METADATAXML CLOB TEXT C_FACTTABLECOLUMN VARCHAR2(50) VARCHAR(50) C_TABLENAME VARCHAR2(50) VARCHAR(50) C_COLUMNNAME VARCHAR2(50724. Usage of XML blobs
XML blobs are utilized by filling the column C_METADATAXML in the table I2B2 with a certain XML data structure which is saved in the database as a single Character Large Object. They are made for representing laboratory values and similar observations that uses qualifying statements like "abnormal" or "primary". XMLOntology Table
INT INT C_BASECODE VARCHAR2(50) VARCHAR(50) C_METADATAXML CLOB TEXT C_FACTTABLECOLUMN VARCHAR2(50) VARCHAR(50Ontology basics.ppt
> [ Also includes ETL directives ] c_metadataxml DataType will contain the code for what kind of data to expect for this test. Possible valuesreleaseNotes_1710.pdf
1.7.10 Release Notes i2b2 Release 1.7.10 Release Date: May 14, 2018 Release Summary Release 1.7.10 contains several new enhancements to the i2b2 kernel, many of which improve the security around signing into the i2b2 Web Client. We have included some Auditing features like logging all successful and attempted logins iOntology Representation
of ValueMetadata in the “C_METADATAXML” field in metadata table (metadata_genomics in our example) Value metadata There are two value metadata types3.2.2.3 CONTEXT DIAGRAM
) c_comment CLOB c_metadataxml CLOB c_facttablecolumn VARCHAR(50) c_dimtablename VARCHAR(50 … CHAR(3) c_tooltip VARCHAR(900) c_total_num INT c_basecode VARCHAR(50) c_comment CLOB c_metadataxml