[CORE-7] i2b2 on JDK 1.6 requires Axis2 1.1.1 Created: 21/May/09 Updated: 05/Jun/14 Resolved: 27/Oct/11 |
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| Status: | Closed |
| Project: | i2b2 Core Software |
| Component/s: | Install, PM Cell |
| Affects Version/s: | 1.3.00 |
| Fix Version/s: | None |
| Type: | Bug | Priority: | Minor |
| Reporter: | D Ahn | Assignee: | Mike Mendis |
| Resolution: | Fixed | Votes: | 0 |
| Labels: | None | ||
| Remaining Estimate: | Not Specified | ||
| Time Spent: | Not Specified | ||
| Original Estimate: | Not Specified | ||
| Environment: | RHEL 5, JDK 1.6, Tomcat 5.5.26, JBoss 4.2.3.GA-jdk6 | ||
| Rank: | 0|i001fj: |
| Participant/s: |
| Description |
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Java 1.5 is reaching End Of Life on Oct 30, 2009. When deploying i2b2 on JDK 1.6 (1.6.0_13) with JBoss 4.2.3.GA-jdk6, the older Axis2 1.1 release is no longer compatible. The solution is to upgrade to Axis2 1.1.1. To reproduce: 1. Install i2b2 from source according to instructions 2. Go to http://tomcat:port/axis2/services/listServices 3. Output show exception: Exception report message description The server encountered an internal error () that prevented it from fulfilling this request. exception javax.servlet.ServletException: Servlet.init() for servlet AxisServlet threw exception org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117) org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:174) org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:874) org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665) org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528) org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81) org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:689) java.lang.Thread.run(Thread.java:619) root cause javax.xml.stream.FactoryConfigurationError: Provider javax.xml.stream.XMLInputFactory could not be instantiated: java.lang.InstantiationException javax.xml.stream.XMLInputFactory.newInstance(XMLInputFactory.java:158) org.apache.axiom.om.util.StAXUtils.getXMLInputFactory(StAXUtils.java:40) org.apache.axiom.om.util.StAXUtils.createXMLStreamReader(StAXUtils.java:66) org.apache.axis2.deployment.DescriptionBuilder.buildOM(DescriptionBuilder.java:86) org.apache.axis2.deployment.AxisConfigBuilder.populateConfig(AxisConfigBuilder.java:58) org.apache.axis2.deployment.DeploymentEngine.populateAxisConfiguration(DeploymentEngine.java:690) org.apache.axis2.deployment.WarBasedAxisConfigurator.<init>(WarBasedAxisConfigurator.java:129) org.apache.axis2.transport.http.AxisServlet.initConfigContext(AxisServlet.java:373) org.apache.axis2.transport.http.AxisServlet.init(AxisServlet.java:317) org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117) org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:174) org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:874) org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665) org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528) org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81) org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:689) java.lang.Thread.run(Thread.java:619) |
| Comments |
| Comment by Mike Mendis [ 27/Oct/11 ] |
| Try using 4.2.2 for any other install issues check out http://groups.google.com/group/i2b2-install-help |